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autoPROC home page autoPROC Wiki autoPROC manual (local copy) |
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autoPROC 1.0.5 (20170920) | Please cite:
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Program versions used:
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1. Setup
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Host : bl2ws12.gmca.aps.anl.gov
OS : CentOS Linux release 7.4.1708 (Core)
PRETTY_NAME="CentOS Linux 7 (Core)"
REDHAT_SUPPORT_PRODUCT="centos"
REDHAT_SUPPORT_PRODUCT_VERSION="7"
x86_64
3.10.0-693.17.1.el7.x86_64 User : jsmith (group = jsmithGroup) Directory : /mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/process/autoproc-Final Date : Wed Feb 7 14:00:58 CST 2018 autoPROC : /mnt/software/px/autoPROC_snapshot_20170920 -----------------------------------------------------------------------------------------
PRETTY_NAME="CentOS Linux 7 (Core)"
REDHAT_SUPPORT_PRODUCT="centos"
REDHAT_SUPPORT_PRODUCT_VERSION="7"
x86_64
3.10.0-693.17.1.el7.x86_64 User : jsmith (group = jsmithGroup) Directory : /mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/process/autoproc-Final Date : Wed Feb 7 14:00:58 CST 2018 autoPROC : /mnt/software/px/autoPROC_snapshot_20170920 -----------------------------------------------------------------------------------------
Command-line arguments:
-d . -Id FabZ_his_acpP_144_5,/mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/collect,FabZ_his_acpP_144_5_######.cbf,1,1800 -M HighResCutOnCChalf -noANO autoPROC_XdsKeyword_MAXIMUM_NUMBER_OF_JOBS=4 autoPROC_XdsKeyword_MAXIMUM_NUMBER_OF_PROCESSORS=4 -nthreads 4
-d . -Id FabZ_his_acpP_144_5,/mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/collect,FabZ_his_acpP_144_5_######.cbf,1,1800 -M HighResCutOnCChalf -noANO autoPROC_XdsKeyword_MAXIMUM_NUMBER_OF_JOBS=4 autoPROC_XdsKeyword_MAXIMUM_NUMBER_OF_PROCESSORS=4 -nthreads 4
1.1. Checking input
ID Directory Files Range
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FabZ_his_acpP_144_5 /mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/collect FabZ_his_acpP_144_5_######.cbf 1-1800
2.1. Indexing
Header information from first image
(/mnt/beegfs/jsmith/23IDB_2018_02_07_cbf/GJD/FabZ_his_acpP_144/collect/FabZ_his_acpP_144_5_000001.cbf):
exposure time [seconds] = 0.200
distance [mm] = 300.000
wavelength [A] = 1.033202
Omega-angle (start, end) [degree] = -20.00000 -19.80000
Oscillation-angle in Omega [degree] = 0.20000
2-Theta angle [degree] = 0.00000
Beam centre in X [pixel] = 2045.000
Beam centre in Y [pixel] = 2256.000
Using spots from images 1-1800
ERROR
[x_scale-0008] during scaling with aP_scale - see aP_scale.logERROR
[process-0035] during scaling - see aboveElapsed time = 1054 seconds